bnlcas 0db42306ec Extend std var for variable dimensions request 999 (#1444)
* initial implementation of multidimensional std and var

* consolidated std function into var, cleaned up the interface for var, fixed bias correction

* added documentation of variable axis for std and var

* updated documentation for std and var

* changed the order of normalization and dimension for a three parameter input in the functions

* updated documentation for var and std

* add transform expressions for std and var with variable axis

* added test coverage for std and var with a variable axis

* update to documentation

* change n dim std to use apply function

* fixed tests, removed unnecessary code, updated docs

* fixed typo in docs

* update docs to remove a type

* changed location of apply function

* updated tests to use deepStrictEqual to pass linter

* adding test coverage for var.transform and std.transform
2019-03-20 15:21:55 +01:00

125 lines
4.8 KiB
JavaScript

const assert = require('assert')
const math = require('../../../src/main')
const BigNumber = math.type.BigNumber
const Complex = math.type.Complex
const DenseMatrix = math.type.DenseMatrix
const Unit = math.type.Unit
const variance = math['var']
describe('variance', function () {
it('should return the variance of numbers', function () {
assert.strictEqual(variance(5), 0)
assert.strictEqual(variance(2, 4, 6), 4)
})
it('should return the variance of big numbers', function () {
assert.deepStrictEqual(variance(new BigNumber(2), new BigNumber(4), new BigNumber(6)),
new math.type.BigNumber(4))
})
it('should return the variance of complex numbers', function () {
assert.deepStrictEqual(variance(new Complex(2, 3), new Complex(-1, 2)), new Complex(4, 3))
})
it('should return the variance of mixed numbers and complex numbers', function () {
assert.deepStrictEqual(variance(2, new Complex(-1, 3)), new Complex(0, -9))
})
it('should return the variance from an array', function () {
assert.strictEqual(variance([2, 4, 6]), 4)
assert.strictEqual(variance([5]), 0)
})
it('should return the uncorrected variance from an array', function () {
assert.strictEqual(variance([2, 4], 'uncorrected'), 1)
assert.strictEqual(variance([2, 4, 6, 8], 'uncorrected'), 5)
})
it('should return the biased variance from an array', function () {
assert.strictEqual(variance([2, 8], 'biased'), 6)
assert.strictEqual(variance([2, 4, 6, 8], 'biased'), 4)
})
it('should return NaN if any of the inputs contains NaN', function () {
assert(isNaN(variance([NaN])))
assert(isNaN(variance([1, NaN])))
assert(isNaN(variance([NaN, 1])))
assert(isNaN(variance([1, 3, NaN])))
assert(isNaN(variance([NaN, NaN, NaN])))
assert(isNaN(variance(NaN, NaN, NaN)))
})
it('should throw an error in case of unknown type of normalization', function () {
assert.throws(function () { variance([2, 8], 'foo') }, /Unknown normalization/)
})
it('should throw an error in case the dimension exceeds the matrix dimension', function () {
assert.throws(function () { variance([[2, 4, 6], [1, 3, 5]], 5) }, /Index out of range/)
})
it('should return the variance from an 1d matrix', function () {
assert.strictEqual(variance(new DenseMatrix([2, 4, 6])), 4)
assert.strictEqual(variance(new DenseMatrix([5])), 0)
})
it('should return the variance element from a 2d array', function () {
assert.deepStrictEqual(variance([
[2, 4, 6],
[1, 3, 5]
]), 3.5)
})
it('should return the variance element from a 2d matrix', function () {
assert.deepStrictEqual(variance(new DenseMatrix([
[2, 4, 6],
[1, 3, 5]
])), 3.5)
})
const inputMatrix = [ // this is a 4x3x2 matrix, full test coverage
[ [10, 200], [30, 40], [50, 60] ],
[ [70, 80], [90, 100], [180, 120] ],
[ [130, 140], [160, 150], [170, 110] ],
[ [190, 20], [210, 220], [230, 240] ]
]
it('should return the variance value along a dimension on a matrix', function () {
assert.deepStrictEqual(variance([
[2, 6],
[4, 10]], 1), [8, 18])
assert.deepStrictEqual(variance([
[2, 6],
[4, 10]], 0), [2, 8])
assert.deepStrictEqual(variance(inputMatrix, 0),
[[6000, 6000], [6225, 5825], [5825, 5825]])
assert.deepStrictEqual(variance(inputMatrix, 1),
[[400, 7600], [3433.3333333333335, 400], [433.33333333333337, 433.33333333333337], [400, 14800]])
assert.deepStrictEqual(variance(inputMatrix, 2),
[[18050, 50, 50], [50, 50, 1800], [50, 50, 1800], [14450, 50, 50]])
})
it('should throw an error if called with invalid number of arguments', function () {
assert.throws(function () { variance() })
})
it('should throw an error if called with invalid type of arguments', function () {
assert.throws(function () { variance(new Date(), 2) }, /Cannot calculate var, unexpected type of argument/)
assert.throws(function () { variance(new Unit(5, 'cm'), new Unit(10, 'cm')) }, /Cannot calculate var, unexpected type of argument/)
assert.throws(function () { variance(2, 3, null) }, /Cannot calculate var, unexpected type of argument/)
assert.throws(function () { variance([2, 3, null]) }, /Cannot calculate var, unexpected type of argument/)
assert.throws(function () { variance([[2, 4, 6], [1, 3, 5]], 'biased', 0) }, /Cannot convert "biased" to a number/)
assert.throws(function () { variance([[2, 4, 6], [1, 3, 5]], 0, new Date()) }, /Cannot calculate var, unexpected type of argument/)
})
it('should throw an error if the axis exceeds the dimension of the matrix')
it('should throw an error if called with an empty array', function () {
assert.throws(function () { variance([]) })
})
it('should LaTeX var', function () {
const expression = math.parse('var(1,2,3)')
assert.strictEqual(expression.toTex(), '\\mathrm{Var}\\left(1,2,3\\right)')
})
})